J3_8UJJ_005
3D structure
- PDB id
- 8UJJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated A-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.56 Å
Loop
- Sequence
- CAGUC*GUGCG*CGACG
- Length
- 15 nucleotides
- Bulged bases
- 8UJJ|1|L5|C|704, 8UJJ|1|L5|C|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UJJ|1|L5|C|451
8UJJ|1|L5|A|452
8UJJ|1|L5|G|453
8UJJ|1|L5|U|454
8UJJ|1|L5|C|455
*
8UJJ|1|L5|G|701
8UJJ|1|L5|U|702
8UJJ|1|L5|G|703
8UJJ|1|L5|C|704
8UJJ|1|L5|G|705
*
8UJJ|1|L5|C|1292
8UJJ|1|L5|G|1293
8UJJ|1|L5|A|1294
8UJJ|1|L5|C|1295
8UJJ|1|L5|G|1296
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- Large ribosomal subunit protein eL6
- Chain Le
- 60S ribosomal protein L32
- Chain Lf
- 60S ribosomal protein L35a
- Chain Lr
- 60S ribosomal protein L28
Coloring options: