J3_8UU5_038

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGU*AUGUU*GCAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU5|1|a|U|1082
8UU5|1|a|G|1083
8UU5|1|a|U|1084
*
8UU5|1|a|A|1091
8UU5|1|a|U|1092
8UU5|1|a|G|1093
8UU5|1|a|U|1094
8UU5|1|a|U|1095
*
8UU5|1|a|G|1108
8UU5|1|a|C|1109
8UU5|1|a|A|1110
8UU5|1|a|A|1111

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain b

Small ribosomal subunit protein uS2

Chain e

Small ribosomal subunit protein uS5