J3_8UU6_016

3D structure

PDB id

8UU6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACCAC*GCUUUC*GAC

Length

15 nucleotides

Bulged bases

8UU6|1|a|U|1034

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU6|1|a|G|1012
8UU6|1|a|A|1013
8UU6|1|a|C|1014
8UU6|1|a|C|1015
8UU6|1|a|A|1016
8UU6|1|a|C|1017
*
8UU6|1|a|G|1030
8UU6|1|a|C|1031
8UU6|1|a|U|1032
8UU6|1|a|U|1033
8UU6|1|a|U|1034
8UU6|1|a|C|1035
*
8UU6|1|a|G|1044
8UU6|1|a|A|1045
8UU6|1|a|C|1046

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain c

Small ribosomal subunit protein uS3

Chain n

Small ribosomal subunit protein uS14