J3_8UU9_007

3D structure

PDB id

8UU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUC*GUC*GGGAAGACGGAAGU

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU9|1|A|A|1494
8UU9|1|A|U|1495
8UU9|1|A|C|1496
*
8UU9|1|A|G|1515
8UU9|1|A|U|1516
8UU9|1|A|C|1517
*
8UU9|1|A|G|1576
8UU9|1|A|G|1577
8UU9|1|A|G|1578
8UU9|1|A|A|1579
8UU9|1|A|A|1580
8UU9|1|A|G|1581
8UU9|1|A|A|1592
8UU9|1|A|C|1593
8UU9|1|A|G|1594
8UU9|1|A|G|1595
8UU9|1|A|A|1596
8UU9|1|A|A|1597
8UU9|1|A|G|1598
8UU9|1|A|U|1599

Current chains

Chain A

23S Ribosomal RNA

Nearby chains