J3_8UXA_003

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAUCUA*UAGUAG*CAAAUCUGG

Length

22 nucleotides

Bulged bases

8UXA|1|A|U|595, 8UXA|1|A|A|680, 8UXA|1|A|U|681, 8UXA|1|A|U|683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXA|1|A|C|592
8UXA|1|A|G|593
8UXA|1|A|A|594
8UXA|1|A|U|595
8UXA|1|A|C|596
8UXA|1|A|U|597
8UXA|1|A|A|598
*
8UXA|1|A|U|664
8UXA|1|A|A|665
8UXA|1|A|G|666
8UXA|1|A|U|667
8UXA|1|A|A|668
8UXA|1|A|G|669
*
8UXA|1|A|C|677
8UXA|1|A|A|678
8UXA|1|A|A|679
8UXA|1|A|A|680
8UXA|1|A|U|681
8UXA|1|A|C|682
8UXA|1|A|U|683
8UXA|1|A|G|684
8UXA|1|A|G|685

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL2m

Chain O

Large ribosomal subunit protein uL22m

Chain Y

Large ribosomal subunit protein bL34m