J3_8UXA_024

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACUUAAG*CUAGUAA*UGAAUAUUCUAAC

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXA|1|AL|G|997
8UXA|1|AL|A|998
8UXA|1|AL|C|999
8UXA|1|AL|U|1000
8UXA|1|AL|U|1001
8UXA|1|AL|A|1002
8UXA|1|AL|A|1003
8UXA|1|AL|G|1004
*
8UXA|1|AL|C|1412
8UXA|1|AL|U|1413
8UXA|1|AL|A|1414
8UXA|1|AL|G|1415
8UXA|1|AL|U|1416
8UXA|1|AL|A|1417
8UXA|1|AL|A|1418
*
8UXA|1|AL|U|1441
8UXA|1|AL|G|1442
8UXA|1|AL|A|1443
8UXA|1|AL|A|1444
8UXA|1|AL|U|1445
8UXA|1|AL|A|1446
8UXA|1|AL|U|1447
8UXA|1|AL|U|1448
8UXA|1|AL|C|1449
8UXA|1|AL|U|1450
8UXA|1|AL|A|1451
8UXA|1|AL|A|1452
8UXA|1|AL|C|1453

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AM

Transfer RNA; tRNA

Chain Z

Small ribosomal subunit protein mS37

Chain m

Small ribosomal subunit protein uS7m

Chain o

Small ribosomal subunit protein uS9m