J3_8V03_027

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

8V03|1|2|U|1212, 8V03|1|2|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8V03_027 not in the Motif Atlas

Geometric match to J3_5J7L_007

Geometric discrepancy: 0.2364

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

8V03|1|2|C|990
8V03|1|2|U|991
8V03|1|2|U|992
8V03|1|2|G|993
*
8V03|1|2|C|1045
8V03|1|2|A|1046
8V03|1|2|G|1047
*
8V03|1|2|C|1210
8V03|1|2|U|1211
8V03|1|2|U|1212
8V03|1|2|A|1213
8V03|1|2|C|1214
8V03|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS14