J3_8V03_031

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UAU*AGACUGC*GAGGAAGGUG

Length

20 nucleotides

Bulged bases

8V03|1|2|C|1158, 8V03|1|2|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|U|1116
8V03|1|2|A|1117
8V03|1|2|U|1118
*
8V03|1|2|A|1155
8V03|1|2|G|1156
8V03|1|2|A|1157
8V03|1|2|C|1158
8V03|1|2|U|1159
8V03|1|2|G|1160
8V03|1|2|C|1161
*
8V03|1|2|G|1175
8V03|1|2|A|1176
8V03|1|2|G|1177
8V03|1|2|G|1178
8V03|1|2|A|1179
8V03|1|2|A|1180
8V03|1|2|G|1181
8V03|1|2|G|1182
8V03|1|2|U|1183
8V03|1|2|G|1184

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain l

30S ribosomal protein S7

Chain n

Small ribosomal subunit protein uS9

Chain o

Small ribosomal subunit protein uS10

Chain s

Small ribosomal subunit protein uS14