J3_8V84_011
3D structure
- PDB id
- 8V84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAC*GCUAAGGAGUG*CUCAC
- Length
- 19 nucleotides
- Bulged bases
- 8V84|1|1|A|1263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V84|1|1|G|1230
8V84|1|1|A|1231
8V84|1|1|C|1232
*
8V84|1|1|G|1256
8V84|1|1|C|1257
8V84|1|1|U|1258
8V84|1|1|A|1259
8V84|1|1|A|1260
8V84|1|1|G|1261
8V84|1|1|G|1262
8V84|1|1|A|1263
8V84|1|1|G|1264
8V84|1|1|U|1265
8V84|1|1|G|1266
*
8V84|1|1|C|1275
8V84|1|1|U|1276
8V84|1|1|C|1277
8V84|1|1|A|1278
8V84|1|1|C|1279
Current chains
- Chain 1
- Saccharomyces cerevisiae 25S ribosomal RNA
Nearby chains
- Chain W
- Ribosome assembly factor MRT4
- Chain r
- Ribosome biogenesis protein NSA2
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