J3_8V9J_040

3D structure

PDB id

8V9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUGACAUG*UGCAG*CUUAUG

Length

20 nucleotides

Bulged bases

8V9J|1|a|U|1193, 8V9J|1|a|U|1195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9J|1|a|U|972
8V9J|1|a|U|973
8V9J|1|a|U|974
8V9J|1|a|G|975
8V9J|1|a|A|976
8V9J|1|a|C|977
8V9J|1|a|A|978
8V9J|1|a|U|979
8V9J|1|a|G|980
*
8V9J|1|a|U|1023
8V9J|1|a|G|1024
8V9J|1|a|C|1025
8V9J|1|a|A|1026
8V9J|1|a|G|1027
*
8V9J|1|a|C|1191
8V9J|1|a|U|1192
8V9J|1|a|U|1193
8V9J|1|a|A|1194
8V9J|1|a|U|1195
8V9J|1|a|G|1196

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S Ribosomal Protein S14