J3_8VK0_012

3D structure

PDB id

8VK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

CGUCCAU*AAG*CGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK0|1|A|C|1531
8VK0|1|A|G|1532
8VK0|1|A|U|1533
8VK0|1|A|C|1534
8VK0|1|A|C|1535
8VK0|1|A|A|1536
8VK0|1|A|U|1537
*
8VK0|1|A|A|1635
8VK0|1|A|A|1636
8VK0|1|A|G|1637
*
8VK0|1|A|C|1801
8VK0|1|A|G|1802
8VK0|1|A|A|1803
8VK0|1|A|G|1804

Current chains

Chain A

23S ribosomal RNA

Nearby chains