J3_8VKW_006

3D structure

PDB id

8VKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to delNTE-HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

8VKW|1|A|U|330, 8VKW|1|A|U|445

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKW|1|A|U|325
8VKW|1|A|A|326
8VKW|1|A|U|327
8VKW|1|A|C|328
8VKW|1|A|U|329
8VKW|1|A|U|330
8VKW|1|A|U|331
*
8VKW|1|A|A|350
8VKW|1|A|G|351
8VKW|1|A|G|352
*
8VKW|1|A|C|443
8VKW|1|A|U|444
8VKW|1|A|U|445
8VKW|1|A|G|446
8VKW|1|A|A|447
8VKW|1|A|U|448
8VKW|1|A|G|449
8VKW|1|A|G|450

Current chains

Chain A

23S ribosomal RNA

Nearby chains