J3_8VR4_014
3D structure
- PDB id
- 8VR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AUUG*UCUAAC*GGACAGU
- Length
- 17 nucleotides
- Bulged bases
- 8VR4|1|A|A|2421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VR4|1|A|A|2313
8VR4|1|A|U|2314
8VR4|1|A|U|2315
8VR4|1|A|G|2316
*
8VR4|1|A|U|2418
8VR4|1|A|C|2419
8VR4|1|A|U|2420
8VR4|1|A|A|2421
8VR4|1|A|A|2422
8VR4|1|A|C|2423
*
8VR4|1|A|G|2447
8VR4|1|A|G|2448
8VR4|1|A|A|2449
8VR4|1|A|C|2450
8VR4|1|A|A|2451
8VR4|1|A|G|2452
8VR4|1|A|U|2453
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L9
- Chain Y
- 50S Ribosomal Protein L28
Coloring options: