J3_8VR4_018
3D structure
- PDB id
- 8VR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCC*GAUUGAU*AACCG
- Length
- 15 nucleotides
- Bulged bases
- 8VR4|1|A|U|3054, 8VR4|1|A|A|3056, 8VR4|1|A|C|3105, 8VR4|1|A|C|3106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VR4|1|A|C|3035
8VR4|1|A|C|3036
8VR4|1|A|C|3037
*
8VR4|1|A|G|3051
8VR4|1|A|A|3052
8VR4|1|A|U|3053
8VR4|1|A|U|3054
8VR4|1|A|G|3055
8VR4|1|A|A|3056
8VR4|1|A|U|3057
*
8VR4|1|A|A|3103
8VR4|1|A|A|3104
8VR4|1|A|C|3105
8VR4|1|A|C|3106
8VR4|1|A|G|3107
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L17
- Chain b
- 50S ribosomal protein L32
Coloring options: