J3_8VTU_032

3D structure

PDB id

8VTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VTU|1|2a|G|1002
8VTU|1|2a|G|1003
8VTU|1|2a|A|1004
8VTU|1|2a|A|1005
8VTU|1|2a|C|1006
*
8VTU|1|2a|G|1023
8VTU|1|2a|G|1024
8VTU|1|2a|U|1025
8VTU|1|2a|G|1026
8VTU|1|2a|C|1027
8VTU|1|2a|C|1028
*
8VTU|1|2a|G|1033
8VTU|1|2a|G|1034
8VTU|1|2a|A|1035
8VTU|1|2a|G|1036
8VTU|1|2a|C|1037
8VTU|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains