J3_8VUP_007

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|1|G|1055
8VUP|1|1|G|1056
8VUP|1|1|A|1057
8VUP|1|1|U|1058
*
8VUP|1|1|A|1080
8VUP|1|1|U|1081
8VUP|1|1|U|1082
8VUP|1|1|U|1083
8VUP|1|1|A|1084
8VUP|1|1|A|1085
8VUP|1|1|A|1086
8VUP|1|1|G|1087
*
8VUP|1|1|C|1102
8VUP|1|1|A|1103
8VUP|1|1|C|1104

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L36