J3_8VUP_011

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGGGACG*CC*GAAAAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|1|G|1423
8VUP|1|1|G|1424
8VUP|1|1|G|1425
8VUP|1|1|G|1426
8VUP|1|1|A|1427
8VUP|1|1|C|1428
8VUP|1|1|G|1429
*
8VUP|1|1|C|1564
8VUP|1|1|C|1565
*
8VUP|1|1|G|1568
8VUP|1|1|A|1569
8VUP|1|1|A|1570
8VUP|1|1|A|1571
8VUP|1|1|A|1572
8VUP|1|1|G|1573
8VUP|1|1|C|1574
8VUP|1|1|C|1575

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2