J3_8VUP_015
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUC*GUAUG*CAUUUAAAG
- Length
- 18 nucleotides
- Bulged bases
- 8VUP|1|1|A|2518, 8VUP|1|1|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VUP|1|1|C|2517
8VUP|1|1|A|2518
8VUP|1|1|U|2519
8VUP|1|1|C|2520
*
8VUP|1|1|G|2545
8VUP|1|1|U|2546
8VUP|1|1|A|2547
8VUP|1|1|U|2548
8VUP|1|1|G|2549
*
8VUP|1|1|C|2559
8VUP|1|1|A|2560
8VUP|1|1|U|2561
8VUP|1|1|U|2562
8VUP|1|1|U|2563
8VUP|1|1|A|2564
8VUP|1|1|A|2565
8VUP|1|1|A|2566
8VUP|1|1|G|2567
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
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