J3_8VUP_020

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGGUU*AGCUUGA*UGACG

Length

17 nucleotides

Bulged bases

8VUP|1|2|U|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|C|586
8VUP|1|2|G|587
8VUP|1|2|G|588
8VUP|1|2|U|589
8VUP|1|2|U|590
*
8VUP|1|2|A|649
8VUP|1|2|G|650
8VUP|1|2|C|651
8VUP|1|2|U|652
8VUP|1|2|U|653
8VUP|1|2|G|654
8VUP|1|2|A|655
*
8VUP|1|2|U|751
8VUP|1|2|G|752
8VUP|1|2|A|753
8VUP|1|2|C|754
8VUP|1|2|G|755

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S8

Chain q

Small ribosomal subunit protein uS12

Chain t

30S ribosomal protein S15

Chain v

30S ribosomal protein S17