J3_8VVP_039
3D structure
- PDB id
- 8VVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGGCAUGC*GAGGGACAAG*CCCGAGAUUG
- Length
- 29 nucleotides
- Bulged bases
- 8VVP|1|ZA|U|1397, 8VVP|1|ZA|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVP|1|ZA|C|1391
8VVP|1|ZA|U|1392
8VVP|1|ZA|G|1393
8VVP|1|ZA|G|1394
8VVP|1|ZA|C|1395
8VVP|1|ZA|A|1396
8VVP|1|ZA|U|1397
8VVP|1|ZA|G|1398
8VVP|1|ZA|C|1399
*
8VVP|1|ZA|G|1447
8VVP|1|ZA|A|1448
8VVP|1|ZA|G|1449
8VVP|1|ZA|G|1450
8VVP|1|ZA|G|1451
8VVP|1|ZA|A|1452
8VVP|1|ZA|C|1453
8VVP|1|ZA|A|1454
8VVP|1|ZA|A|1455
8VVP|1|ZA|G|1456
*
8VVP|1|ZA|C|1470
8VVP|1|ZA|C|1471
8VVP|1|ZA|C|1472
8VVP|1|ZA|G|1473
8VVP|1|ZA|A|1474
8VVP|1|ZA|G|1475
8VVP|1|ZA|A|1476
8VVP|1|ZA|U|1477
8VVP|1|ZA|U|1478
8VVP|1|ZA|G|1479
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain CC
- S28
- Chain DB
- S3
- Chain DC
- uS14
- Chain FB
- S5
- Chain GC
- RACK1
- Chain QB
- uS9
- Chain RB
- eS17
- Chain UB
- uS10
Coloring options: