J3_8VVR_009

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

8VVR|1|WA|A|1807, 8VVR|1|WA|U|1836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|U|1728
8VVR|1|WA|U|1729
*
8VVR|1|WA|A|1804
8VVR|1|WA|G|1805
8VVR|1|WA|A|1806
8VVR|1|WA|A|1807
8VVR|1|WA|G|1808
*
8VVR|1|WA|C|1834
8VVR|1|WA|G|1835
8VVR|1|WA|U|1836
8VVR|1|WA|G|1837
8VVR|1|WA|G|1838
8VVR|1|WA|A|1839

Current chains

Chain WA

28S rRNA

Nearby chains

Chain AA

L29

Chain F

uL30

Chain S

eL21