J3_8VVR_018

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

8VVR|1|WA|U|4376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|G|4230
8VVR|1|WA|U|4231
8VVR|1|WA|C|4232
*
8VVR|1|WA|G|4333
8VVR|1|WA|C|4334
8VVR|1|WA|C|4335
8VVR|1|WA|U|4336
8VVR|1|WA|C|4337
8VVR|1|WA|A|4338
8VVR|1|WA|C|4339
8VVR|1|WA|G|4340
8VVR|1|WA|A|4341
8VVR|1|WA|U|4342
8VVR|1|WA|C|4343
8VVR|1|WA|C|4344
*
8VVR|1|WA|G|4372
8VVR|1|WA|G|4373
8VVR|1|WA|U|4374
8VVR|1|WA|G|4375
8VVR|1|WA|U|4376
8VVR|1|WA|C|4377

Current chains

Chain WA

28S rRNA

Nearby chains

Chain NA

eL42

Chain P

eL18

Chain S

eL21

Chain TA

Transfer RNA; tRNA

Chain Z

uL15