J3_8VVS_018

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

8VVS|1|WA|U|4376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|WA|G|4230
8VVS|1|WA|U|4231
8VVS|1|WA|C|4232
*
8VVS|1|WA|G|4333
8VVS|1|WA|C|4334
8VVS|1|WA|C|4335
8VVS|1|WA|U|4336
8VVS|1|WA|C|4337
8VVS|1|WA|A|4338
8VVS|1|WA|C|4339
8VVS|1|WA|G|4340
8VVS|1|WA|A|4341
8VVS|1|WA|U|4342
8VVS|1|WA|C|4343
8VVS|1|WA|C|4344
*
8VVS|1|WA|G|4372
8VVS|1|WA|G|4373
8VVS|1|WA|U|4374
8VVS|1|WA|G|4375
8VVS|1|WA|U|4376
8VVS|1|WA|C|4377

Current chains

Chain WA

28S rRNA

Nearby chains

Chain NA

eL42

Chain P

eL18

Chain S

eL21

Chain TA

Transfer RNA; tRNA

Chain Z

uL15