J3_8VVS_029

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

8VVS|1|ZA|C|1138, 8VVS|1|ZA|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|C|1094
8VVS|1|ZA|C|1095
8VVS|1|ZA|G|1096
*
8VVS|1|ZA|U|1136
8VVS|1|ZA|U|1137
8VVS|1|ZA|C|1138
8VVS|1|ZA|C|1139
8VVS|1|ZA|G|1140
*
8VVS|1|ZA|C|1147
8VVS|1|ZA|A|1148
8VVS|1|ZA|A|1149
8VVS|1|ZA|A|1150
8VVS|1|ZA|G|1151

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain AB

RPSA

Chain AC

S26

Chain BC

S27

Chain CB

eS1

Chain VB

S21

Chain WB

S15A