J3_8WIB_001

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

8WIB|1|A|U|318, 8WIB|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIB|1|A|G|317
8WIB|1|A|U|318
8WIB|1|A|G|319
*
8WIB|1|A|C|457
8WIB|1|A|G|458
8WIB|1|A|A|459
8WIB|1|A|G|460
8WIB|1|A|U|461
8WIB|1|A|A|462
8WIB|1|A|G|463
*
8WIB|1|A|U|487
8WIB|1|A|G|488
8WIB|1|A|A|489
8WIB|1|A|A|490
8WIB|1|A|U|491
8WIB|1|A|C|492

Current chains

Chain A

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L28

Chain J

50S ribosomal protein L9