J3_8WIC_016

3D structure

PDB id

8WIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

8WIC|1|A|U|330, 8WIC|1|A|U|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIC|1|A|U|325
8WIC|1|A|A|326
8WIC|1|A|U|327
8WIC|1|A|C|328
8WIC|1|A|U|329
8WIC|1|A|U|330
8WIC|1|A|U|331
*
8WIC|1|A|A|350
8WIC|1|A|G|351
8WIC|1|A|G|352
*
8WIC|1|A|C|443
8WIC|1|A|U|444
8WIC|1|A|U|445
8WIC|1|A|G|446
8WIC|1|A|A|447
8WIC|1|A|U|448
8WIC|1|A|G|449
8WIC|1|A|G|450

Current chains

Chain A

23S rRNA

Nearby chains