J3_8WID_006

3D structure

PDB id

8WID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACG*UUCC*GGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WID|1|a|G|986
8WID|1|a|A|987
8WID|1|a|C|988
8WID|1|a|G|989
*
8WID|1|a|U|1006
8WID|1|a|U|1007
8WID|1|a|C|1008
8WID|1|a|C|1009
*
8WID|1|a|G|1015
8WID|1|a|G|1016
8WID|1|a|C|1017

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S14A