J3_8XT0_003

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAGCCUG*CAACC*GCA

Length

16 nucleotides

Bulged bases

8XT0|1|L1|A|755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|L1|U|666
8XT0|1|L1|A|667
8XT0|1|L1|A|668
8XT0|1|L1|G|669
8XT0|1|L1|C|670
8XT0|1|L1|C|671
8XT0|1|L1|U|672
8XT0|1|L1|G|673
*
8XT0|1|L1|C|753
8XT0|1|L1|A|754
8XT0|1|L1|A|755
8XT0|1|L1|C|756
8XT0|1|L1|C|757
*
8XT0|1|L1|G|766
8XT0|1|L1|C|767
8XT0|1|L1|A|768

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LW

Large ribosomal subunit protein uL23m

Chain Lh

Large ribosomal subunit protein bL34m

Chain Lo

Large ribosomal subunit protein mL41

Chain Sf

Large ribosomal subunit protein mL65