J3_8XT0_018
3D structure
- PDB id
- 8XT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUCAG*CGCAAGUA*UAAAGACG
- Length
- 22 nucleotides
- Bulged bases
- 8XT0|1|S1|U|623
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XT0|1|S1|C|621
8XT0|1|S1|U|622
8XT0|1|S1|U|623
8XT0|1|S1|C|624
8XT0|1|S1|A|625
8XT0|1|S1|G|626
*
8XT0|1|S1|C|655
8XT0|1|S1|G|656
8XT0|1|S1|C|657
8XT0|1|S1|A|658
8XT0|1|S1|A|659
8XT0|1|S1|G|660
8XT0|1|S1|U|661
8XT0|1|S1|A|662
*
8XT0|1|S1|U|669
8XT0|1|S1|A|670
8XT0|1|S1|A|671
8XT0|1|S1|A|672
8XT0|1|S1|G|673
8XT0|1|S1|A|674
8XT0|1|S1|C|675
8XT0|1|S1|G|676
Current chains
- Chain S1
- 12s rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein uS5m
- Chain SG
- Small ribosomal subunit protein uS7m
- Chain SI
- Small ribosomal subunit protein uS9m
- Chain SJ
- Small ribosomal subunit protein uS10m
- Chain SN
- Small ribosomal subunit protein uS14m
- Chain SZ
- Small ribosomal subunit protein uS3m
- Chain Sk
- Small ribosomal subunit protein mS35
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