J3_8XT1_006
3D structure
- PDB id
- 8XT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAACC*GAUGAAA*UAUAACCAAG
- Length
- 24 nucleotides
- Bulged bases
- 8XT1|1|L1|C|143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XT1|1|L1|C|2
8XT1|1|L1|U|3
8XT1|1|L1|A|4
8XT1|1|L1|A|5
8XT1|1|L1|A|6
8XT1|1|L1|C|7
8XT1|1|L1|C|8
*
8XT1|1|L1|G|127
8XT1|1|L1|A|128
8XT1|1|L1|U|129
8XT1|1|L1|G|130
8XT1|1|L1|A|131
8XT1|1|L1|A|132
8XT1|1|L1|A|133
*
8XT1|1|L1|U|137
8XT1|1|L1|A|138
8XT1|1|L1|U|139
8XT1|1|L1|A|140
8XT1|1|L1|A|141
8XT1|1|L1|C|142
8XT1|1|L1|C|143
8XT1|1|L1|A|144
8XT1|1|L1|A|145
8XT1|1|L1|G|146
Current chains
- Chain L1
- 16s rRNA
Nearby chains
- Chain LT
- Large ribosomal subunit protein bL20m
- Chain LV
- 39S ribosomal protein L22, mitochondrial
- Chain LX
- Large ribosomal subunit protein uL24m
- Chain Lf
- Large ribosomal subunit protein bL32m
- Chain Lr
- Large ribosomal subunit protein mL44
- Chain Ls
- Large ribosomal subunit protein mL45
- Chain Lu
- Large ribosomal subunit protein uL29m
- Chain Ly
- Large ribosomal subunit protein mL51
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