J3_8XT1_007
3D structure
- PDB id
- 8XT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAG*CAAUAGAUAUAGUAC*GGAAAG
- Length
- 25 nucleotides
- Bulged bases
- 8XT1|1|L1|U|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XT1|1|L1|C|8
8XT1|1|L1|U|9
8XT1|1|L1|A|10
8XT1|1|L1|G|11
*
8XT1|1|L1|C|101
8XT1|1|L1|A|102
8XT1|1|L1|A|103
8XT1|1|L1|U|104
8XT1|1|L1|A|105
8XT1|1|L1|G|106
8XT1|1|L1|A|107
8XT1|1|L1|U|108
8XT1|1|L1|A|109
8XT1|1|L1|U|110
8XT1|1|L1|A|111
8XT1|1|L1|G|112
8XT1|1|L1|U|113
8XT1|1|L1|A|114
8XT1|1|L1|C|115
*
8XT1|1|L1|G|122
8XT1|1|L1|G|123
8XT1|1|L1|A|124
8XT1|1|L1|A|125
8XT1|1|L1|A|126
8XT1|1|L1|G|127
Current chains
- Chain L1
- 16s rRNA
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL4m
- Chain LT
- Large ribosomal subunit protein bL20m
- Chain LW
- Large ribosomal subunit protein uL23m
- Chain LX
- Large ribosomal subunit protein uL24m
- Chain Lh
- Large ribosomal subunit protein bL34m
- Chain Lo
- Large ribosomal subunit protein mL41
- Chain Lr
- Large ribosomal subunit protein mL44
- Chain Lu
- Large ribosomal subunit protein uL29m
- Chain Ly
- Large ribosomal subunit protein mL51
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