J3_8XZ3_001

3D structure

PDB id

8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

8XZ3|1|A|U|318, 8XZ3|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XZ3|1|A|G|317
8XZ3|1|A|U|318
8XZ3|1|A|G|319
*
8XZ3|1|A|C|457
8XZ3|1|A|G|458
8XZ3|1|A|A|459
8XZ3|1|A|G|460
8XZ3|1|A|U|461
8XZ3|1|A|A|462
8XZ3|1|A|G|463
*
8XZ3|1|A|U|487
8XZ3|1|A|G|488
8XZ3|1|A|A|489
8XZ3|1|A|A|490
8XZ3|1|A|U|491
8XZ3|1|A|C|492

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain Y

Large ribosomal subunit protein bL28