J3_8Y36_005

3D structure

PDB id

8Y36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UUG*CUAACCC*GGAGACAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y36|1|A|U|2118
8Y36|1|A|U|2119
8Y36|1|A|G|2120
*
8Y36|1|A|C|2223
8Y36|1|A|U|2224
8Y36|1|A|A|2225
8Y36|1|A|A|2226
8Y36|1|A|C|2227
8Y36|1|A|C|2228
8Y36|1|A|C|2229
*
8Y36|1|A|G|2248
8Y36|1|A|G|2249
8Y36|1|A|A|2250
8Y36|1|A|G|2251
8Y36|1|A|A|2252
8Y36|1|A|C|2253
8Y36|1|A|A|2254
8Y36|1|A|G|2255

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL2

Chain V

Large ribosomal subunit protein bL28