J3_8Y37_008

3D structure

PDB id

8Y37 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CAA*UUAUAAG*CGAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y37|1|A|C|2816
8Y37|1|A|A|2817
8Y37|1|A|A|2818
*
8Y37|1|A|U|2825
8Y37|1|A|U|2826
8Y37|1|A|A|2827
8Y37|1|A|U|2828
8Y37|1|A|A|2829
8Y37|1|A|A|2830
8Y37|1|A|G|2831
*
8Y37|1|A|C|2909
8Y37|1|A|G|2910
8Y37|1|A|A|2911
8Y37|1|A|A|2912
8Y37|1|A|G|2913

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3