J3_8Z70_021
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUGAAAAGAAC*GAGUGAAAAAGUACGUGAAAU*ACGGAUCU
- Length
- 40 nucleotides
- Bulged bases
- 8Z70|1|A|A|398, 8Z70|1|A|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Z70|1|A|A|369
8Z70|1|A|U|370
8Z70|1|A|G|371
8Z70|1|A|A|372
8Z70|1|A|A|373
8Z70|1|A|A|374
8Z70|1|A|A|375
8Z70|1|A|G|376
8Z70|1|A|A|377
8Z70|1|A|A|378
8Z70|1|A|C|379
*
8Z70|1|A|G|390
8Z70|1|A|A|391
8Z70|1|A|G|392
8Z70|1|A|U|393
8Z70|1|A|G|394
8Z70|1|A|A|395
8Z70|1|A|A|396
8Z70|1|A|A|397
8Z70|1|A|A|398
8Z70|1|A|A|399
8Z70|1|A|G|400
8Z70|1|A|U|401
8Z70|1|A|A|402
8Z70|1|A|C|403
8Z70|1|A|G|404
8Z70|1|A|U|405
8Z70|1|A|G|406
8Z70|1|A|A|407
8Z70|1|A|A|408
8Z70|1|A|A|409
8Z70|1|A|U|410
*
8Z70|1|C|A|13
8Z70|1|C|C|14
8Z70|1|C|G|15
8Z70|1|C|G|16
8Z70|1|C|A|17
8Z70|1|C|U|18
8Z70|1|C|C|19
8Z70|1|C|U|20
Current chains
- Chain A
- 25S rRNA
- Chain C
- 5.8S rRNA
Nearby chains
- Chain F
- Large ribosomal subunit protein uL4A
- Chain R
- Large ribosomal subunit protein uL22A
- Chain a
- Large ribosomal subunit protein uL24A
- Chain g
- Large ribosomal subunit protein eL32
- Chain n
- Large ribosomal subunit protein eL39
Coloring options: