J3_8Z71_023
3D structure
- PDB id
- 8Z71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAACUAU*AUAG*CGAA
- Length
- 16 nucleotides
- Bulged bases
- 8Z71|1|A|A|817, 8Z71|1|A|G|924, 8Z71|1|A|A|925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Z71|1|A|U|814
8Z71|1|A|G|815
8Z71|1|A|A|816
8Z71|1|A|A|817
8Z71|1|A|C|818
8Z71|1|A|U|819
8Z71|1|A|A|820
8Z71|1|A|U|821
*
8Z71|1|A|A|904
8Z71|1|A|U|905
8Z71|1|A|A|906
8Z71|1|A|G|907
*
8Z71|1|A|C|923
8Z71|1|A|G|924
8Z71|1|A|A|925
8Z71|1|A|A|926
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL2A
- Chain P
- Large ribosomal subunit protein eL15A
- Chain l
- Large ribosomal subunit protein eL37A
- Chain n
- Large ribosomal subunit protein eL39
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