J3_8ZAU_003

3D structure

PDB id

8ZAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a methyl transferase ribozyme mutant - C29U and A59G

Experimental method

X-RAY DIFFRACTION

Resolution

2.43 Å

Loop

Sequence

CUGACCGACCC*GACAACUAGACAUAC*G(1MA)G

Length

29 nucleotides

Bulged bases

8ZAU|1|A|U|39

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_65214.1

Basepair signature

cWW-tWH-F-F-cWW-cWS-F-tSW-cWW-cSW-F-cWW-F-F-F-F-F-cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

8ZAU|1|A|C|6
8ZAU|1|A|U|7
8ZAU|1|A|G|8
8ZAU|1|A|A|9
8ZAU|1|A|C|10
8ZAU|1|A|C|11
8ZAU|1|A|G|12
8ZAU|1|A|A|13
8ZAU|1|A|C|14
8ZAU|1|A|C|15
8ZAU|1|A|C|16
*
8ZAU|1|A|G|33
8ZAU|1|A|A|34
8ZAU|1|A|C|35
8ZAU|1|A|A|36
8ZAU|1|A|A|37
8ZAU|1|A|C|38
8ZAU|1|A|U|39
8ZAU|1|A|A|40
8ZAU|1|A|G|41
8ZAU|1|A|A|42
8ZAU|1|A|C|43
8ZAU|1|A|A|44
8ZAU|1|A|U|45
8ZAU|1|A|A|46
8ZAU|1|A|C|47
*
8ZAU|1|A|G|62
8ZAU|1|A|1MA|63
8ZAU|1|A|G|64

Current chains

Chain A

RNA (69-MER)

Nearby chains