J3_8ZHB_012

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAC*GCUAAGG*CACC

Length

14 nucleotides

Bulged bases

8ZHB|1|LA|A|1258

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|LA|G|1229
8ZHB|1|LA|A|1230
8ZHB|1|LA|C|1231
*
8ZHB|1|LA|G|1255
8ZHB|1|LA|C|1256
8ZHB|1|LA|U|1257
8ZHB|1|LA|A|1258
8ZHB|1|LA|A|1259
8ZHB|1|LA|G|1260
8ZHB|1|LA|G|1261
*
8ZHB|1|LA|C|1276
8ZHB|1|LA|A|1277
8ZHB|1|LA|C|1278
8ZHB|1|LA|C|1279

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains