J3_8ZHB_033
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAAAAAUUAGAG*CAG*UCGAAUAUAUUAGC
- Length
- 30 nucleotides
- Bulged bases
- 8ZHB|1|S2|U|792, 8ZHB|1|S2|A|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|S2|G|751
8ZHB|1|S2|A|752
8ZHB|1|S2|A|753
8ZHB|1|S2|A|754
8ZHB|1|S2|A|755
8ZHB|1|S2|A|756
8ZHB|1|S2|A|757
8ZHB|1|S2|U|758
8ZHB|1|S2|U|759
8ZHB|1|S2|A|760
8ZHB|1|S2|G|761
8ZHB|1|S2|A|762
8ZHB|1|S2|G|763
*
8ZHB|1|S2|C|773
8ZHB|1|S2|A|774
8ZHB|1|S2|G|775
*
8ZHB|1|S2|U|785
8ZHB|1|S2|C|786
8ZHB|1|S2|G|787
8ZHB|1|S2|A|788
8ZHB|1|S2|A|789
8ZHB|1|S2|U|790
8ZHB|1|S2|A|791
8ZHB|1|S2|U|792
8ZHB|1|S2|A|793
8ZHB|1|S2|U|794
8ZHB|1|S2|U|795
8ZHB|1|S2|A|796
8ZHB|1|S2|G|797
8ZHB|1|S2|C|798
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SW
- Small ribosomal subunit protein uS4A
- Chain SX
- Small ribosomal subunit protein uS17A
- Chain Sb
- Small ribosomal subunit protein uS8A
- Chain Sd
- Small ribosomal subunit protein eS24A
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