J3_9AX8_007
3D structure
- PDB id
- 9AX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9AX8_007 not in the Motif Atlas
- Homologous match to J3_5J7L_039
- Geometric discrepancy: 0.071
- The information below is about J3_5J7L_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.7
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
9AX8|1|A|C|698
9AX8|1|A|A|699
9AX8|1|A|G|700
*
9AX8|1|A|C|732
9AX8|1|A|G|733
9AX8|1|A|A|734
9AX8|1|A|A|735
9AX8|1|A|C|736
*
9AX8|1|A|G|760
9AX8|1|A|A|761
9AX8|1|A|U|762
9AX8|1|A|G|763
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L2
Coloring options: