J3_9AX8_030

3D structure

PDB id

9AX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUGACAUCC*GAGACAG*CUUACG

Length

23 nucleotides

Bulged bases

9AX8|1|a|U|1212, 9AX8|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AX8|1|a|C|990
9AX8|1|a|U|991
9AX8|1|a|U|992
9AX8|1|a|G|993
9AX8|1|a|A|994
9AX8|1|a|C|995
9AX8|1|a|A|996
9AX8|1|a|U|997
9AX8|1|a|C|998
9AX8|1|a|C|999
*
9AX8|1|a|G|1041
9AX8|1|a|A|1042
9AX8|1|a|G|1043
9AX8|1|a|A|1044
9AX8|1|a|C|1045
9AX8|1|a|A|1046
9AX8|1|a|G|1047
*
9AX8|1|a|C|1210
9AX8|1|a|U|1211
9AX8|1|a|U|1212
9AX8|1|a|A|1213
9AX8|1|a|C|1214
9AX8|1|a|G|1215

Current chains

Chain a

16S ribosomal RNA

Nearby chains