J3_9AZS_016

3D structure

PDB id

9AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Post-eEF1A-AT-P-E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9AZS|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZS|1|L5|A|2551
9AZS|1|L5|G|2552
9AZS|1|L5|A|2553
9AZS|1|L5|U|2554
9AZS|1|L5|G|2555
*
9AZS|1|L5|C|2572
9AZS|1|L5|A|2573
9AZS|1|L5|G|2574
9AZS|1|L5|U|2575
*
9AZS|1|L5|A|2757
9AZS|1|L5|G|2758
9AZS|1|L5|G|2759
9AZS|1|L5|G|2760
9AZS|1|L5|U|2761
9AZS|1|L5|G|2762
9AZS|1|L5|U|2763
9AZS|1|L5|A|2764
9AZS|1|L5|A|2765
9AZS|1|L5|A|2766
9AZS|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27