J3_9B4Z_012

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|AA|G|1003
9B4Z|1|AA|A|1004
9B4Z|1|AA|A|1005
9B4Z|1|AA|G|1006
*
9B4Z|1|AA|U|1023
9B4Z|1|AA|G|1024
9B4Z|1|AA|U|1025
9B4Z|1|AA|G|1026
9B4Z|1|AA|C|1027
*
9B4Z|1|AA|G|1034
9B4Z|1|AA|A|1035
9B4Z|1|AA|A|1036
9B4Z|1|AA|C|1037

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14