J3_9B4Z_025

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAUG*CAUUUAAAGAAA*UCAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|G|1055
9B4Z|1|BA|G|1056
9B4Z|1|BA|A|1057
9B4Z|1|BA|U|1058
9B4Z|1|BA|G|1059
*
9B4Z|1|BA|C|1079
9B4Z|1|BA|A|1080
9B4Z|1|BA|U|1081
9B4Z|1|BA|U|1082
9B4Z|1|BA|U|1083
9B4Z|1|BA|A|1084
9B4Z|1|BA|A|1085
9B4Z|1|BA|A|1086
9B4Z|1|BA|G|1087
9B4Z|1|BA|A|1088
9B4Z|1|BA|A|1089
9B4Z|1|BA|A|1090
*
9B4Z|1|BA|U|1101
9B4Z|1|BA|C|1102
9B4Z|1|BA|A|1103
9B4Z|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36