J3_9B4Z_033

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

9B4Z|1|BA|U|2334, 9B4Z|1|BA|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|C|2295
9B4Z|1|BA|U|2296
9B4Z|1|BA|A|2297
9B4Z|1|BA|A|2298
9B4Z|1|BA|U|2299
*
9B4Z|1|BA|A|2317
9B4Z|1|BA|G|2318
9B4Z|1|BA|G|2319
9B4Z|1|BA|U|2320
9B4Z|1|BA|U|2321
9B4Z|1|BA|A|2322
9B4Z|1|BA|G|2323
*
9B4Z|1|BA|C|2332
9B4Z|1|BA|A|2333
9B4Z|1|BA|U|2334
9B4Z|1|BA|A|2335
9B4Z|1|BA|A|2336
9B4Z|1|BA|G|2337

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L5

Chain BO

50S ribosomal protein L18

Chain BW

50S ribosomal protein L27