J3_9B51_025

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGA*UUAAAGAAAG*CUCAC

Length

18 nucleotides

Bulged bases

9B51|1|BA|A|1084, 9B51|1|BA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B51|1|BA|G|1055
9B51|1|BA|G|1056
9B51|1|BA|A|1057
*
9B51|1|BA|U|1082
9B51|1|BA|U|1083
9B51|1|BA|A|1084
9B51|1|BA|A|1085
9B51|1|BA|A|1086
9B51|1|BA|G|1087
9B51|1|BA|A|1088
9B51|1|BA|A|1089
9B51|1|BA|A|1090
9B51|1|BA|G|1091
*
9B51|1|BA|C|1100
9B51|1|BA|U|1101
9B51|1|BA|C|1102
9B51|1|BA|A|1103
9B51|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36