J3_9BDL_009
3D structure
- PDB id
- 9BDL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with angiogenin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9BDL|1|A18S|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDL|1|A18S|C|1391
9BDL|1|A18S|U|1392
9BDL|1|A18S|G|1393
9BDL|1|A18S|G|1394
9BDL|1|A18S|C|1395
*
9BDL|1|A18S|G|1450
9BDL|1|A18S|G|1451
9BDL|1|A18S|A|1452
9BDL|1|A18S|C|1453
9BDL|1|A18S|A|1454
9BDL|1|A18S|A|1455
9BDL|1|A18S|G|1456
*
9BDL|1|A18S|C|1470
9BDL|1|A18S|C|1471
9BDL|1|A18S|C|1472
9BDL|1|A18S|G|1473
9BDL|1|A18S|A|1474
9BDL|1|A18S|G|1475
9BDL|1|A18S|A|1476
9BDL|1|A18S|U|1477
9BDL|1|A18S|U|1478
9BDL|1|A18S|G|1479
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain ARAC
- Receptor of activated protein C kinase 1
- Chain AS03
- 40S ribosomal protein S3
- Chain AS05
- Ribosomal protein S5
- Chain AS16
- Small ribosomal subunit protein uS9
- Chain AS17
- 40S ribosomal protein S17
- Chain AS20
- 40S ribosomal protein S20
- Chain AS29
- 40S ribosomal protein S29
Coloring options: