J3_9BDL_033

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

9BDL|1|A28S|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|C|451
9BDL|1|A28S|A|452
9BDL|1|A28S|G|453
9BDL|1|A28S|U|454
9BDL|1|A28S|C|455
*
9BDL|1|A28S|G|701
9BDL|1|A28S|U|702
9BDL|1|A28S|G|703
9BDL|1|A28S|C|704
9BDL|1|A28S|G|705
*
9BDL|1|A28S|C|1292
9BDL|1|A28S|G|1293
9BDL|1|A28S|A|1294
9BDL|1|A28S|U|1295
9BDL|1|A28S|G|1296

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain AL32

Large ribosomal subunit protein eL32

Chain AL33

60S ribosomal protein L35a