J3_9BDN_021

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

9BDN|1|A28S|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|C|4970
9BDN|1|A28S|A|4971
9BDN|1|A28S|U|4972
*
9BDN|1|A28S|G|4986
9BDN|1|A28S|C|4987
9BDN|1|A28S|U|4988
9BDN|1|A28S|U|4989
9BDN|1|A28S|C|4990
9BDN|1|A28S|U|4991
*
9BDN|1|A28S|A|5060
9BDN|1|A28S|A|5061
9BDN|1|A28S|G|5062
9BDN|1|A28S|G|5063

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL17

60S ribosomal protein L17

Chain AL31

60S ribosomal protein L31