J3_9BDP_004
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGAG*CUAC*GGAA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDP|1|A18S|U|1225
9BDP|1|A18S|G|1226
9BDP|1|A18S|G|1227
9BDP|1|A18S|A|1228
9BDP|1|A18S|G|1229
*
9BDP|1|A18S|C|1529
9BDP|1|A18S|U|1530
9BDP|1|A18S|A|1531
9BDP|1|A18S|C|1532
*
9BDP|1|A18S|G|1638
9BDP|1|A18S|G|1639
9BDP|1|A18S|A|1640
9BDP|1|A18S|A|1641
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS05
- Ribosomal protein S5
- Chain AS16
- Small ribosomal subunit protein uS9
- Chain AS18
- 40S ribosomal protein S18
- Chain AS19
- Small ribosomal subunit protein eS19
- Chain ETRN
- Transfer RNA; tRNA
- Chain PTRN
- Transfer RNA; tRNA
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